##FastQC	0.10.0
>>Basic Statistics	pass
#Measure	Value	
Filename	lane4_Index15_2.fq	
File type	Conventional base calls	
Encoding	Illumina 1.5	
Total Sequences	23727416	
Filtered Sequences	0	
Sequence length	90	
%GC	49	
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	32.00305448347178	33.0	31.0	34.0	30.0	34.0
2	32.15163353649635	33.0	31.0	34.0	30.0	34.0
3	32.22282084994	34.0	31.0	34.0	30.0	34.0
4	35.70453950822121	37.0	35.0	37.0	33.0	37.0
5	35.69159739096748	37.0	35.0	37.0	33.0	37.0
6	35.655908717578015	37.0	35.0	37.0	33.0	37.0
7	35.6728765576496	37.0	35.0	37.0	33.0	37.0
8	35.650711565052006	37.0	35.0	37.0	33.0	37.0
9	37.30929364579776	39.0	37.0	39.0	34.0	39.0
10-14	37.510795916420065	39.2	37.2	39.4	33.8	39.4
15-19	38.458605353402156	40.0	38.0	41.0	33.6	41.0
20-24	38.24538729375335	40.0	38.0	41.0	33.2	41.0
25-29	37.92813928832368	40.0	37.6	41.0	32.8	41.0
30-34	37.69280528482326	39.8	37.0	41.0	32.4	41.0
35-39	37.729837644351996	40.0	37.0	41.0	32.2	41.0
40-44	37.375736953404456	39.6	36.4	41.0	31.0	41.0
45-49	36.89019980093913	39.0	35.2	40.6	30.4	41.0
50-54	36.526371628499284	38.8	35.0	40.0	30.0	41.0
55-59	36.19737938593903	38.2	35.0	40.0	29.8	41.0
60-64	35.37188326786195	36.8	34.0	40.0	28.6	41.0
65-69	34.439310922015274	35.6	33.4	39.0	27.6	40.8
70-74	33.45542592585724	35.0	32.8	37.4	26.0	39.8
75-79	32.41798602932574	35.0	31.8	36.2	25.2	38.8
80-84	31.312821758593522	34.2	31.0	35.2	22.6	37.0
85-89	30.046308826886168	34.0	30.4	35.0	12.6	36.0
90	28.93317300122356	34.0	30.0	35.0	2.0	35.0
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
10	323.0
11	2801.0
12	8593.0
13	16916.0
14	27362.0
15	37898.0
16	47616.0
17	56063.0
18	64191.0
19	74157.0
20	86197.0
21	100288.0
22	116397.0
23	136587.0
24	162221.0
25	192820.0
26	231747.0
27	276633.0
28	336300.0
29	409380.0
30	500090.0
31	623838.0
32	786903.0
33	1023258.0
34	1397748.0
35	2026774.0
36	3118990.0
37	4465138.0
38	4876631.0
39	2480458.0
40	43098.0
>>END_MODULE
>>Per base sequence content	fail
#Base	G	A	T	C
1	26.647448672876976	12.293605843973907	10.026772405389615	51.0321730777595
2	22.192654546233218	18.807374370419964	35.2903177181439	23.70965336520291
3	25.650162323186493	21.0097526298439	22.68204762180015	30.658037425169454
4	27.684020579564926	27.44606651396746	19.15753702657855	25.712375879889066
5	29.29512176105688	29.842317977636256	21.389384783864262	19.473175477442602
6	24.31982492325704	32.74438585634217	21.564909393090304	21.370879827310482
7	21.436723023020352	18.956386708461075	37.32646803658136	22.280422231937212
8	21.506346613458323	22.226595739254886	29.049578780148728	27.217478867138066
9	21.567653924995927	20.986187409353978	31.46483381155204	25.981324854098055
10-14	24.52457450941067	26.245118922416466	24.70546227709068	24.524844291082182
15-19	24.88583871713153	25.127068978313083	25.130006760354913	24.857085544200476
20-24	24.651914274242525	25.36754174027825	25.45934182716228	24.52120215831695
25-29	24.52652679919867	25.405966752092002	25.386017258777272	24.68148918993206
30-34	24.54472483940208	25.347014585773604	25.345640586895108	24.76261998792921
35-39	24.555164365955783	25.503950145437265	25.29897269186136	24.641912796745586
40-44	24.519632482675586	25.338460386911095	25.441487258003555	24.700419872409768
45-49	24.467324087020568	25.399639012373253	25.367893174636457	24.76514372596972
50-54	24.473208021458145	25.48998586312387	25.41586788589198	24.620938229526004
55-59	24.503238659843674	25.433163194022246	25.350629787999857	24.712968358134223
60-64	24.41937402643881	25.449136762224278	25.46381865014311	24.6676705611938
65-69	24.432340926189816	25.573937734450357	25.436166294067615	24.557555045292208
70-74	24.506190972688504	25.513192946011976	25.340219994727725	24.640396086571798
75-79	24.48215956381353	25.46031712794226	25.40863230313689	24.648891005107316
80-84	24.43898938754298	25.5935822801361	25.418892534975356	24.548535797345565
85-89	24.554826905043516	25.56920706693166	25.294670090185978	24.581295937838842
90	24.27437799749169	25.67179027284563	25.498272769599396	24.555558960063284
>>END_MODULE
>>Per base GC content	fail
#Base	%GC
1	77.67962175063647
2	45.90230791143613
3	56.308199748355946
4	53.39639645945399
5	48.76829723849948
6	45.69070475056753
7	43.717145254957565
8	48.72382548059639
9	47.54897877909398
10-14	49.04941880049286
15-19	49.74292426133201
20-24	49.173116432559475
25-29	49.20801598913073
30-34	49.30734482733129
35-39	49.19707716270137
40-44	49.22005235508535
45-49	49.232467812990286
50-54	49.09414625098415
55-59	49.2162070179779
60-64	49.08704458763261
65-69	48.98989597148203
70-74	49.146587059260305
75-79	49.13105056892084
80-84	48.98752518488854
85-89	49.13612284288236
90	48.82993695755497
>>END_MODULE
>>Per sequence GC content	pass
#GC Content	Count
0	8.0
1	8.0
2	7.0
3	6.5
4	9.0
5	10.5
6	11.0
7	24.5
8	45.0
9	70.0
10	87.0
11	108.5
12	169.0
13	264.0
14	415.5
15	674.5
16	1197.0
17	2053.0
18	3526.5
19	6220.5
20	7938.0
21	10804.0
22	18299.5
23	29650.5
24	45553.0
25	67112.5
26	95203.5
27	131265.0
28	170942.0
29	213275.0
30	236280.0
31	259070.5
32	306625.0
33	359693.5
34	417689.5
35	474610.5
36	532722.5
37	596938.0
38	653652.0
39	700429.5
40	723826.0
41	739302.0
42	770458.0
43	800467.5
44	819396.0
45	826187.0
46	825244.0
47	819154.5
48	818167.5
49	817876.0
50	815617.0
51	807471.5
52	796503.0
53	782853.0
54	775948.5
55	774296.0
56	761402.0
57	743654.5
58	719258.0
59	688817.0
60	672344.0
61	653261.0
62	614655.5
63	565819.5
64	507560.0
65	450779.5
66	392182.0
67	330625.5
68	274101.5
69	221160.5
70	193950.0
71	170809.5
72	127357.0
73	90959.0
74	61461.0
75	38209.0
76	22132.5
77	11841.0
78	5611.5
79	2390.5
80	1344.0
81	935.5
82	381.0
83	166.0
84	81.0
85	49.0
86	23.5
87	14.5
88	13.0
89	7.5
90	4.0
91	5.0
92	4.5
93	1.5
94	1.0
95	1.0
96	0.0
97	0.0
98	0.0
99	0.0
100	0.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.0
2	0.017119436857346793
3	0.03790130370707034
4	0.046671748832658386
5	0.051236089087829874
6	0.00478349601996273
7	0.019492219464605838
8	0.016095305110341556
9	0.013756238774588855
10-14	0.019089310020105013
15-19	0.008574047844063593
20-24	0.004538210144754068
25-29	0.0020971520876946733
30-34	0.00442610354199547
35-39	0.0017540890251176106
40-44	8.766230591649761E-4
45-49	0.0035444230421045426
50-54	4.5938419927395386E-4
55-59	0.0032915510058069536
60-64	9.364694410887389E-4
65-69	0.004291238455970089
70-74	0.00441430284696825
75-79	0.008752744083047223
80-84	0.0066648639700167935
85-89	0.006648005834263621
90	0.0029628173586200876
>>END_MODULE
>>Sequence Length Distribution	pass
#Length	Count
90	2.3727416E7
>>END_MODULE
>>Sequence Duplication Levels	fail
#Total Duplicate Percentage	55.48644576138185
#Duplication Level	Relative count
1	100.0
2	31.945405779546633
3	17.08124242948607
4	10.76310780411836
5	7.4320816750302825
6	5.418324969717944
7	4.249221318567226
8	3.43809482609448
9	2.7978456480359926
10++	33.175073542135316
>>END_MODULE
>>Overrepresented sequences	pass
>>END_MODULE
>>Kmer Content	warn
#Sequence	Count	Obs/Exp Overall	Obs/Exp Max	Max Obs/Exp Position
CCAGG	4960880	2.5793865	5.2170715	1
CCTGG	4954940	2.5639548	6.2183833	1
GAAGA	5038420	2.5636337	5.103162	2
CTTCT	5218540	2.5304263	5.5064955	1
CTGGA	4766280	2.4397957	8.681383	1
TCCAG	4688035	2.3595812	5.7899914	2
CTCCT	4682525	2.306262	7.4490347	1
CTGGG	4339815	2.2838786	8.387555	1
CAGGA	4336910	2.230694	5.4640417	1
CTTCA	4529320	2.2068024	5.672792	1
CCCAG	4274435	2.1852775	7.2753873	1
CTCCA	4408680	2.1818397	8.124372	1
CTCTG	4068595	2.0379934	6.251815	1
CTGGC	3631130	1.8789437	5.3492165	1
TGGAA	3686395	1.8667138	5.1961174	2
CTGAA	3712040	1.8482413	5.2801185	1
CTCAG	3470910	1.746978	6.057187	1
CTGGT	3247500	1.6543877	5.0623007	1
CTTGG	3221390	1.6410863	5.2735405	1
>>END_MODULE
